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Finding sigma54 potential binding sites in a DNA sequencePlease try Sean Richards' implementation of PromScan at http://molbiol-tools.ca/promscanYou can scan your DNA sequence for patterns such as potential sigma54-dependent promoters by clicking here.Problems?contact me and it may be possible for me to perform the scans for you.Create a matrixfile from alignmentYou can create a matrixfile for use with the PromScan Perl script from alignment promoters by clicking here.Find inverted repeatsYou can also scan your DNA sequence for inverted repeats by clicking here. |