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| Position | Strand | Sequence | Score | Description | Distance upstream | Intergenic size |
| 405092 | + | TTGGCACGCGGCTTGCC | 91 | - Atu5410 - - ABC transporter, nucleotide binding/ATPase protein | 99 | 628 |
| 404643 | - | CTGGCATGCTGATTGCA | 90 | - Atu5409 - - ABC transporter, substrate binding protein [amino acid] | 63 | 628 |
| 445063 | + | ATGGCGCGCGTGTTGCA | 89 | attG Atu5453 - - ABC transporter, membrane spanning protein | 126 | 1089 |