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| Position | Strand | Sequence | Score | Description | Distance upstream | Intergenic size |
| 775640 | - | TTGGCATGGTTTTCGCT | 86 | - CPj0693 - - TPR repeats-CT683 hypothetical protein | 62 | 71 |
| 1000408 | - | CTGGCACGGAGTTAGCC | 85 | ftsK CPj0880 - - cell division protein ftsK | 1226 | 5806 |